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Cyt C B2 Mascot Search Results: CYC

MASCOT Search Results

Protein View: CYC_BOVIN

Cytochrome c OS=Bos taurus GN=CYCS PE=1 SV=2

Database:SwissProt
Score:147
Expect:1.1e-09
Nominal mass (Mr):11696
Calculated pI:9.52
Taxonomy:Bos taurus

Sequence similarity is available as an NCBI BLAST search of CYC_BOVIN against nr.

Search parameters

Enzyme:

Trypsin: cuts C-term side of KR unless next residue is P.

Mass values searched:44
Mass values matched:15

Protein sequence coverage: 90%

Matched peptides shown in bold red.

1MGDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFSYT
51DANKNKGITWGEETLMEYLENPKKYIPGTKMIFAGIKKKGEREDLIAYLK
101KATNE

Unformatted sequence string: 105 residues (for pasting into other applications).

StartEndObservedMr(expt)Mr(calc)DeltaMPeptide
11   149.0510 0M
16 678.1000 677.0927 677.3054 -0.21270-.MGDVEK.G
18   862.4219 1MGDVEKGK
26   546.2649 0GDVEK
28   731.3814 1GDVEKGK
78   203.1270 0GK
79   331.2220 1GKK
99   146.1055 0K
914 762.3000 761.2927 761.4800 -0.18721K.KIFVQK.C
1014 634.1000 633.0927 633.3850 -0.29230K.IFVQK.C
1023 1633.6000 1632.5927 1632.8116 -0.21891K.IFVQKCAQCHTVEK.G
1523   1017.4372 0CAQCHTVEK
1526   1259.5751 1CAQCHTVEKGGK
2426   260.1485 0GGK
2428   525.3023 1GGKHK
2728   283.1644 0HK
2739   1432.7688 1HKTGPNLHGLFGR
2939 1168.6000 1167.5927 1167.6149 -0.02220K.TGPNLHGLFGR.K
2940   1295.7099 1TGPNLHGLFGRK
4040   146.1055 0K
4054 1584.8000 1583.7927 1583.7580 0.03471R.KTGQAPGFSYTDANK.N
4154 1456.7000 1455.6927 1455.6630 0.02970K.TGQAPGFSYTDANK.N
4156   1697.8009 1TGQAPGFSYTDANKNK
5556   260.1485 0NK
5573   2251.0831 1NKGITWGEETLMEYLENPK
5773 2009.9000 2008.8927 2008.9452 -0.05240K.GITWGEETLMEYLENPK.K
5774 2138.0000 2136.9927 2137.0401 -0.04741K.GITWGEETLMEYLENPKK.Y
7474   146.1055 0K
7480 806.3000 805.2927 805.4698 -0.17701K.KYIPGTK.M
7580   677.3748 0YIPGTK
7587   1437.8054 1YIPGTKMIFAGIK
8187 779.3000 778.2927 778.4411 -0.14840K.MIFAGIK.K
8188 907.4000 906.3927 906.5361 -0.14331K.MIFAGIKK.K
8888   146.1055 0K
8889   274.2005 1KK
8989   146.1055 0K
8992   488.2707 1KGER
9092   360.1757 0GER
90100 1306.7000 1305.6927 1305.6928 -0.00011K.GEREDLIAYLK.K
93100 964.4000 963.3927 963.5277 -0.13490R.EDLIAYLK.K
93101   1091.6227 1EDLIAYLKK
101101   146.1055 0K
101105 561.9000 560.8927 561.2758 -0.38311K.KATNE.-
102105   433.1809 0ATNE

No match to: 549.0000, 551.2000, 579.2000, 589.0000, 617.0000, 618.0000, 659.1000, 677.1000, 795.3000, 802.3000, 805.3000, 916.3000, 955.4000, 1037.4000, 1117.5000, 1153.5000, 1193.6000, 1285.6000, 1321.7000, 1434.8000, 1562.9000, 1635.6000, 1758.8000, 1914.9000, 1918.9000, 2163.0000, 2193.0000, 2273.1000, 2323.0000


AC   P62894; P00006; Q2KJD4;DT   21-JUL-1986, integrated into UniProtKB/Swiss-Prot.DT   23-JAN-2007, sequence version 2.DT   05-SEP-2012, entry version 80.DE   RecName: Full=Cytochrome c;GN   Name=CYCS; Synonyms=CYC;OS   Bos taurus (Bovine).OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;OC   Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia;OC   Pecora; Bovidae; Bovinae; Bos.OX   NCBI_TaxID=9913;RN   [1]RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].RC   STRAIN=Hereford; TISSUE=Thymus;RG   NIH - Mammalian Gene Collection (MGC) project;RL   Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.RN   [2]RP   PROTEIN SEQUENCE OF 2-105, AND ACETYLATION AT GLY-2.RC   TISSUE=Heart;RX   MEDLINE=66132521; PubMed=5933874;RA   Nakashima T., Higa H., Matsubara H., Benson A.M., Yasunobu K.T.;RT   "The amino acid sequence of bovine heart cytochrome c.";RL   J. Biol. Chem. 241:1166-1177(1966).RN   [3]RP   PHOSPHORYLATION AT TYR-49.RC   TISSUE=Heart;RX   PubMed=16866357; DOI=10.1021/bi060585v;RA   Lee I., Salomon A.R., Yu K., Doan J.W., Grossman L.I., Huttemann M.;RT   "New prospects for an old enzyme: mammalian cytochrome c is tyrosine-RT   phosphorylated in vivo.";RL   Biochemistry 45:9121-9128(2006).RN   [4]RP   PHOSPHORYLATION AT TYR-98.RC   TISSUE=Liver;RX   PubMed=18471988; DOI=10.1016/j.bbabio.2008.04.023;RA   Yu H., Lee I., Salomon A.R., Yu K., Huttemann M.;RT   "Mammalian liver cytochrome c is tyrosine-48 phosphorylated in vivo,RT   inhibiting mitochondrial respiration.";RL   Biochim. Biophys. Acta 1777:1066-1071(2008).RN   [5]RP   X-RAY CRYSTALLOGRAPHY (1.5 ANGSTROMS) OF 2-105, AND HEME-BINDINGRP   SITES.RX   PubMed=17634981; DOI=10.1002/prot.21452;RA   Mirkin N., Jaconcic J., Stojanoff V., Moreno A.;RT   "High resolution X-ray crystallographic structure of bovine heartRT   cytochrome c and its application to the design of an electron transferRT   biosensor.";RL   Proteins 70:83-92(2008).CC   -!- FUNCTION: Electron carrier protein. The oxidized form of theCC       cytochrome c heme group can accept an electron from the heme groupCC       of the cytochrome c1 subunit of cytochrome reductase. Cytochrome cCC       then transfers this electron to the cytochrome oxidase complex,CC       the final protein carrier in the mitochondrial electron-transportCC       chain.CC   -!- FUNCTION: Plays a role in apoptosis. Suppression of the anti-CC       apoptotic members or activation of the pro-apoptotic members ofCC       the Bcl-2 family leads to altered mitochondrial membraneCC       permeability resulting in release of cytochrome c into theCC       cytosol. Binding of cytochrome c to Apaf-1 triggers the activationCC       of caspase-9, which then accelerates apoptosis by activating otherCC       caspases (By similarity).CC   -!- SUBCELLULAR LOCATION: Mitochondrion intermembrane space.CC       Note=Loosely associated with the inner membrane.CC   -!- PTM: Binds 1 heme group per subunit.CC   -!- PTM: Phosphorylation at Tyr-49 and Tyr-98 both reduce by half theCC       turnover in the reaction with cytochrome c oxidase, down-CC       regulating mitochondrial respiration.CC   -!- SIMILARITY: Belongs to the cytochrome c family.CC   -!- WEB RESOURCE: Name=Protein Spotlight; Note=Life shuttle - Issue 76CC       of November 2006;CC       URL="http://web.expasy.org/spotlight/back_issues/sptlt076.shtml";CC   -----------------------------------------------------------------------CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/termsCC   Distributed under the Creative Commons Attribution-NoDerivs LicenseCC   -----------------------------------------------------------------------DR   EMBL; BC105397; AAI05398.1; -; mRNA.DR   IPI; IPI00906486; -.DR   PIR; A92022; CCBO.DR   RefSeq; NP_001039526.1; NM_001046061.1.DR   RefSeq; XP_003582877.1; XM_003582829.1.DR   RefSeq; XP_003582879.1; XM_003582831.1.DR   RefSeq; XP_003586721.1; XM_003586673.1.DR   UniGene; Bt.23981; -.DR   PDB; 2B4Z; X-ray; 1.50 A; A=2-105.DR   PDB; 2YBB; EM; 19.00 A; Y=2-105.DR   PDBsum; 2B4Z; -.DR   PDBsum; 2YBB; -.DR   ProteinModelPortal; P62894; -.DR   SMR; P62894; 2-105.DR   DIP; DIP-58978N; -.DR   IntAct; P62894; 1.DR   STRING; P62894; -.DR   PRIDE; P62894; -.DR   Ensembl; ENSBTAT00000004594; ENSBTAP00000051780; ENSBTAG00000023823.DR   Ensembl; ENSBTAT00000007918; ENSBTAP00000007918; ENSBTAG00000022613.DR   GeneID; 100847700; -.DR   GeneID; 100850794; -.DR   GeneID; 510767; -.DR   KEGG; bta:100847700; -.DR   KEGG; bta:100850794; -.DR   KEGG; bta:510767; -.DR   CTD; 54205; -.DR   eggNOG; COG3474; -.DR   GeneTree; ENSGT00390000009405; -.DR   HOGENOM; HOG000009762; -.DR   HOVERGEN; HBG003023; -.DR   InParanoid; P62894; -.DR   KO; K08738; -.DR   OMA; IAYLKQY; -.DR   OrthoDB; EOG45DWQX; -.DR   EvolutionaryTrace; P62894; -.DR   NextBio; 20869605; -.DR   GO; GO:0005758; C:mitochondrial intermembrane space; IEA:UniProtKB-SubCell.DR   GO; GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.DR   GO; GO:0009055; F:electron carrier activity; IEA:InterPro.DR   GO; GO:0020037; F:heme binding; IEA:InterPro.DR   GO; GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.DR   GO; GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.DR   GO; GO:0006810; P:transport; IEA:UniProtKB-KW.DR   Gene3D; G3DSA:1.10.760.10; Cytochrome_c_R; 1.DR   InterPro; IPR002327; Cyt_c_1A/1B.DR   InterPro; IPR009056; Cyt_c_dom.DR   InterPro; IPR003088; Cyt_c_I.DR   PANTHER; PTHR11961; Cyt_CIAB; 1.DR   Pfam; PF00034; Cytochrom_C; 1.DR   PRINTS; PR00604; CYTCHRMECIAB.DR   SUPFAM; SSF46626; Cytochrome_c; 1.DR   PROSITE; PS51007; CYTC; 1.PE   1: Evidence at protein level;KW   3D-structure; Acetylation; Apoptosis; Complete proteome;KW   Direct protein sequencing; Electron transport; Heme; Iron;KW   Metal-binding; Mitochondrion; Phosphoprotein; Reference proteome;KW   Respiratory chain; Transport.FT   INIT_MET      1      1       Removed.FT   CHAIN         2    105       Cytochrome c.FT                                /FTId=PRO_0000108209.FT   METAL        19     19       Iron (heme axial ligand).FT   METAL        81     81       Iron (heme axial ligand).FT   BINDING      15     15       Heme (covalent).FT   BINDING      18     18       Heme (covalent).FT   MOD_RES       2      2       N-acetylglycine.FT   MOD_RES      49     49       Phosphotyrosine.FT   MOD_RES      98     98       Phosphotyrosine.FT   HELIX         4     14FT   TURN         15     18FT   HELIX        51     55FT   HELIX        62     68FT   HELIX        72     75FT   HELIX        89    102SQ   SEQUENCE   105 AA;  11704 MW;  AF0CA628EDF40483 CRC64;     MGDVEKGKKI FVQKCAQCHT VEKGGKHKTG PNLHGLFGRK TGQAPGFSYT DANKNKGITW     GEETLMEYLE NPKKYIPGTK MIFAGIKKKG EREDLIAYLK KATNE
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